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BYA3 SECTION 12.1

Bacteria and Viruses as Examples of Pathogenic Microorganisms

  • Both, bacteria and viruses, are called microbes
  • Infectious or communicable diseases are caused by pathogens
  • Pathogens gain entry; colonise tissues; resist defences; damage host tissues;

Bacteria (single celled, prokaryotic)
  • Only small number are pathogens
  • Asexually reproduction by binary fission / 2 identical daughter cells
  • Grow best at optimum conditions (human body)
    • Constant temperature
    • Neutral pH
    • Constant supply of food, H2O, O2
    • Mechanism removing waste
  • Most bacteria are aerobic / obligated aerobes
  • Aerobic bacteria growing with absent oxygen / facultative anaerobes
  • Bacteria which find oxygen toxic / obligate anaerobes

Sigmoid growth curve shows the number of bacteria plotted against time
  • Bacteria MUST grow in closed system and nutrient medium → BACTERIAL CULTURE
    • 1) Population grows slowly - LAG PHASE
    • 2) Rapid increase of population growth - LOG PHASE
    • 3) Reaches equilibrium when number remains constant - STATIONARY PHASE
  • Lag Phase → initial phase
    • Low number of reproducing organisms
    • Bacteria increase in size before division
    • This requires nutrients which need to be digested
    • Digestion requires enzymes, proteins activation of genes → time consuming process
  • Log Phase → exponential phase; max growth rate; steep curve
    • Optimum conditions: no limiting factors, waste does not accumulate to a toxic level
    • Bacteria most susceptible due to production of new cells
      • Antibiotics inhibit cell wall formation
      • Antibiotics inhibit DNA replication
      • Antibiotics inhibit protein synthesis
  • Stationary Phase → reduced growth rate
    • New cell production balanced by death of cells
    • Limiting factors, declining nutrients, accumulating waste influence population size
  • Decline Phase → bacteria stop dividing
    • Death rate increases; numbers may fall to zero
    • Lack of nutrients, build up of toxic waste products
  • Aseptic conditions: sterilise equipment, instruments, … to prevent contamination with the culture.
    Use high temp and disinfectants

Total cell count
  • Number of cells whether living or dead
  • Count cells with haemocytometer
  • Stop bacteria entering the flask with a stopper. Important as bacteria would have been caused reduced growth rate of yeast/killed yeast and competed for space/nutrients
  • Culture is shaken to achieve a uniform distribution of yeast cells/spread out yeast
  • Larger number is taken to avoid anomalies/produce an average

Measurement of growth
Generation time: time taken for a bacterial population to double
  • Rate of population
 = increase in number of yeast cells/time
 = number larger - number less/(time larger - time less)
  • Suppose the number of cells in one square are 6 8 9 5 7
  • The sum of the cells in 5 squares is 35
  • The mean for one type B square is 7
  • Therefore 25 squares have 25 x 7 = 175 in 0.1mm3
  • In 1mm3 there will be 1750 cells or 1,8 x 103

Viable cell count
  • Only living cells since these are the only ones capable of dividing
  • 1cm3 original sample is diluted in 9cm3 distilled H2O
  • Mix 1cm3 from last dilution with 9cm3 distilled H2O - serial dilution
  • 1cm3 of each dilution is put on an agar plate and counted. Number is multiplied by the dilution factor

Measurement of growth
  • Number of colonies on the 10-3 dilution plate = 35
  • Number of viable colonies in 1cm3 of 10-4 dilution of milk
    • 35 x 1/0.1 = 350
  • Sample was diluted by 10-3
  • Number of bacteria in 1cm3 of the original sample = 350 x 103

Biological factors
  • Bacteria are effected in growing by nutrients: C, H, N, P, S
  • Temp: low → low speed of enzyme reactions; high → denaturisation of enzymes
  • pH → tolerate a wider range of pH than plant and animal cells
  • O2 → some grow better in presence, but some grow in absence

Viruses (200nm)
  1. Consists of a core containing genetic material DNA or RNA
  2. This is surrounded by a protective coat of protein called capsid (subunits: capsomeres)
  3. The capsid is (sometimes) surrounded by an envelope of lipoprotein
  4. Antigens, glycoproteins on its surface recognize receptors on T-lymphocytes
  • They cause damage by taking over the host cell for multiplication
  • Do not have a cellular structure / don't respire or need food
  • Transmitted via sexual contact; infected woman passing it to her baby through the placenta
  • Also by receiving blood from an infected person

Human Immunodeficiency Virus HIV
  • AIDS (Acquired Immune Deficiency Syndrome)
    • All T-helper cells infected (and destroyed)
    • Number of T lymphocytes decrease dramatically / sign for the disease
    • People highly susceptible to infections, diseases and cancer
  • Retrovirus: core contains reverse transcriptase and its genetic material as RNA
  • HIV can change its surface proteins and evade the immune system / vaccination is difficult

Cycle of infection
  1. HIV enters body from HIV +ve persons via body fluids such as blood or semen
  2. Viral glycoprotein attaches to receptors on cell membrane of T-helper cells
  3. HIV enters cell by endocytosis, releasing its RNA and reserve transcriptase into the cytoplasm
  4. Reverse transcriptase copies viral RNA strand
  5. This forms a double stranded viral DNA in the nucleus of T-helper cell / now called "provirus"
  6. Viral DNA is integrated into the host DNA / host cell replicates with provirus
  7. Latency period (variable period of time) → Infection of more cells, but no symptoms
  8. Outbreak: host DNA is transcribed to make new viral RNA. Proteins necessary for the capsid and for the envelope are synthesised by the infected host cell
  9. New viruses assembled with RNA and proteins leave the cell by exocytosis - viral envelope is constructed from the cell membrane of the host cell

Association of microorganisms with disease
Koch's Postulates1
  • A list of postulates (criteria) must be fulfilled to proof an infective cause for a disease
    • "Organism must be sufficiently abundant in every case to account for the disease
    • Organism associated with the disease can be cultivated artificially in pure culture
    • Cultivated organism produces the disease upon inoculation into another member of the same species
    • Antibodies to the organism appear during the course of the disease"1
  • Exceptions are possible
    • Number of organism causing disease might be very low (eg tuberculosis)
    • Cultivation might be difficult
    • Animals must be used as it is unethical to infect a human with a causative organism
    • Antibodies may not appear if the immune system is inhibited

Entry of Microorganisms (Pathogens) into the Body
  • Damaged skin
    • Skin acts as a barrier to infections
    • Tetanus occurs when the bacterium Clostridium tetani enters a wound
  • Mucus membrane of respiratory tract
    • Air containing droplet of infectious material are breathed in
    • Mycobacterium tuberculosis causes tuberculosis
  • Digestive track
    • Vibrio cholerae causes cholera when drinking water infected with faeces
    • Salmonella enteritis causes food poisoning when eating undercooked food
    • These organisms are resistant to acidic conditions in the stomach
    • Acid protects against microorganisms by providing a hostile environment
  • Others
    • Transmission by vectors (e.g. malaria via Plasmodium parasite when mosquito vector takes blood)
    • Direct entry through the intact skin (e.g. Schistosomiasis where the larval stage schistosome burrows through the skin of the feet)

Pathogenesis: How Microorganisms Cause Disease
  • Damage or destroy host cells - e.g. HIV, Salmonella
    • Organism is taken up by epithelial cells in the intestine
      • HOST SPECIFIC: ligand on pathogen must fit onto receptor proteins on host
      • Some hosts are more susceptible than others because proteins depend on gene coding
    • Destroy brush border of microvilli
    • Host creates a ruffled surface / Invaded cells detach from intestinal wall, creating inflamed lesions / Secretion of large amounts of watery fluid into the lumen of the gut → diarrhoea
  • Produce toxic waste - e.g. Vibrio cholerae
    • Are harmless but produce harmful "exotoxins" - toxins released from the cell
    • Causes loss of chloride and hydrogencarbonate ions from the intestinal cells
    • Osmotic loss of up to 10 litres of water per day
    • Impaired absorption of water and salt from the gut
    • This explains severe watery diarrhoea and death from dehydration
  • Body's own immune response to the presence of microorganisms which produce the symptom
    - e.g. Mycobacterium tuberculosis
    • Body tries do destroy the invading bacteria
    • This causes inflammation and damage to the surrounding cells occur
    • Lesions may become hard or spongy, leaving "holes" in the lungs, sometimes damaging blood vessels
  • Some bacteria will cause all of the 3 ways above; Some require a large number of bacteria for a disease; Some will only a few number of bacteria
  • Microorganisms may enter the lymphatic system via tissue fluid and are carried around the body in this way
  • Ability of bacteria to cause disease relies on
    • Location - what tissue is colonised
    • Infectivity - how easily a bacterium can enter the host cell
    • Invasiveness - how easily a bacterium or its toxin spreads within the body
    • Pathogenicity - how a bacterium cause disease

References and Further Reading
1) UNDERWOOD, JCE (2004) General and Systematic Pathology, 4th edition. London: Churchill Livingstone
AQA (2006) GCE Biology/Biology (Human) 2006 specification, [PDF]
BAKER, M, INDGE, B, & ROWLAND, M (2001) Further Studies in Human Biology. Hodder Arnold H&S

BYA3 SECTION:12.112.212.312.412.512.612.712.812.9
 

 

 

 

 

 

 
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